RRTree
RRTree is a program for relative-rate tests. It compares substitution
rates between DNA or protein sequences grouped in phylogenetically defined
lineages: Relative-Rate Tests with a tree.
Use of RRTree
RRTree is an inline program, with no graphical interface, which can potentially
run on any platform with a standard C compiler. You need an entry file
of sequences (PHYLIP,
CLUSTAL,
MASE,
NEXUS,
GDE, or FASTA).
To take phylogeny into account you also need a tree file, in
Newick
format.
Download RRTree
RRTree, example files and a documentation file, can be downloaded through
our FTP server.
You may also use the following table to directly access the version corresponding
to your computer:
Documentation
Reference
If you use RRTree in a published work, please cite the following
reference:
-
RRTree: Relative-rate tests between groups of sequences on a phylogenetic
tree. Robinson-Rechavi M, Huchon D. (2000) Bioinformatics, 16,
296-297.
If you have any problems or comments about RRTree, please contact
Marc Robinson-Rechavi.
If you have problems or comments...
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